Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010846.1 Corchorus capsularis cultivar CVL-1 contig10867, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21392

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--34
2
17.0
2
100
0
68
50
0
0
50
1.00
1668--1699
16
2.0
16
100
0
64
12
18
6
62
1.50
1667--1702
16
2.3
15
90
9
63
11
16
5
66
1.40
10946--11002
29
2.0
29
96
0
105
26
19
10
43
1.83
10509--11267
390
1.9
390
89
2
1157
26
22
21
28
1.99
12351--12406
21
2.8
21
86
7
73
44
0
55
0
0.99
12351--12419
9
7.7
9
77
6
68
42
0
55
2
1.15
12352--12421
15
4.5
15
81
10
68
41
0
55
2
1.14
12355--12495
33
4.1
33
79
10
129
44
0
47
7
1.35
12403--12524
39
3.3
39
82
13
166
42
1
44
11
1.50
12358--12495
18
7.8
18
70
16
83
44
0
47
7
1.36
12403--12496
33
2.6
34
90
9
136
45
1
42
10
1.45
15662--15697
18
2.0
18
100
0
72
38
11
22
27
1.88
17398--17422
12
2.1
12
100
0
50
24
16
28
32
1.96
18679--20445
868
2.0
848
88
4
2614
28
17
18
34
1.94

Tables:   1

The End!