Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010849.1 Corchorus capsularis cultivar CVL-1 contig10870, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51770

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11904--11947
21
2.1
21
83
8
54
36
2
6
54
1.40
13673--13701
14
2.1
14
100
0
58
72
0
0
27
0.85
14514--14545
8
4.0
8
100
0
64
37
37
25
0
1.56
29196--29231
2
18.0
2
94
0
63
50
0
2
47
1.15
30682--30706
11
2.3
11
100
0
50
32
0
20
48
1.50
43285--43311
13
2.1
13
100
0
54
29
14
0
55
1.40
47077--47118
18
2.3
18
84
8
50
73
0
23
2
0.94
47077--47124
25
2.0
23
84
8
60
70
2
22
4
1.15
47813--47874
12
5.5
12
70
14
51
48
8
1
41
1.42
47813--47885
21
3.2
23
88
9
114
46
8
1
43
1.42
49427--49453
7
3.9
7
100
0
54
14
29
25
29
1.95
49629--49657
13
2.1
14
93
6
51
58
0
0
41
0.98
49629--49657
7
4.3
7
91
8
51
58
0
0
41
0.98

Tables:   1

The End!