Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001085.1 Corchorus capsularis cultivar CVL-1 contig01085, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14729

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
2
21.5
2
85
14
59
47
0
0
52
1.00
437--465
2
14.5
2
100
0
58
48
0
0
51
1.00
465--493
2
14.5
2
100
0
58
0
0
48
51
1.00
5200--5298
35
3.0
35
92
7
163
48
2
11
38
1.50
5217--5298
15
5.1
15
70
18
67
48
1
12
37
1.48
7943--7976
12
3.0
12
91
8
54
0
20
0
79
0.73
7938--7980
13
3.0
15
83
16
56
2
20
0
76
0.89
7945--7986
12
3.6
11
84
15
50
0
23
0
76
0.79

Tables:   1

The End!