Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010852.1 Corchorus capsularis cultivar CVL-1 contig10873, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47364

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3999--4060
29
2.1
29
82
5
72
25
8
22
43
1.80
6234--6328
33
3.1
32
78
13
101
27
9
4
58
1.48
10730--10915
93
2.0
91
89
2
282
39
12
20
26
1.89
33837--33902
29
2.3
28
80
17
66
19
6
10
63
1.47
47064--47094
16
1.9
16
93
0
53
29
0
19
51
1.47

Tables:   1

The End!