Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010855.1 Corchorus capsularis cultivar CVL-1 contig10876, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52562

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2871--2925
27
2.0
28
89
3
85
47
0
14
38
1.45
4177--4590
165
2.5
168
85
7
531
30
22
20
25
1.98
4772--5183
204
2.0
202
95
0
743
34
18
19
27
1.95
6722--6762
22
1.9
21
90
5
64
7
21
17
53
1.67
9579--9835
132
1.9
132
87
3
374
26
15
23
34
1.94
12670--12703
3
11.3
3
93
0
59
0
64
0
35
0.94
33136--33190
24
2.3
24
90
0
83
25
41
5
27
1.77
34033--34076
22
2.0
22
82
8
54
63
2
9
25
1.35
51757--51825
24
2.9
24
78
8
86
23
5
27
43
1.76

Tables:   1

The End!