Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010858.1 Corchorus capsularis cultivar CVL-1 contig10879, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21442

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1565--1854
109
2.6
108
91
6
449
50
1
10
37
1.47
4026--4070
19
2.3
19
88
3
63
37
20
2
40
1.65
9522--9694
70
2.3
75
82
11
191
38
10
0
49
1.42
9522--9676
70
2.2
70
88
2
222
36
11
0
50
1.43
9777--9820
23
1.9
23
85
0
61
38
6
4
50
1.50
18809--21430
321
8.2
319
79
6
2756
36
16
14
32
1.89
18266--21441
642
4.9
634
87
5
4329
36
16
14
32
1.88

Tables:   1

The End!