Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010866.1 Corchorus capsularis cultivar CVL-1 contig10887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27446

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9471--9529
30
2.0
29
90
3
91
47
13
0
38
1.43
20052--20155
45
2.5
40
78
14
120
38
16
24
21
1.93
20070--20175
45
2.4
45
86
0
149
34
19
24
20
1.96
21992--22057
32
2.0
33
94
2
116
28
22
13
34
1.92
24223--24306
42
2.0
42
93
4
143
20
26
14
39
1.90

Tables:   1

The End!