Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010875.1 Corchorus capsularis cultivar CVL-1 contig10896, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18651

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2167--2208
2
21.0
2
95
0
75
47
0
0
52
1.00
5699--5729
16
2.0
16
93
6
55
38
0
22
38
1.54
7950--8113
56
3.0
55
72
21
173
38
13
10
37
1.79
9396--9429
2
16.5
2
87
6
50
44
0
2
52
1.16
11199--11226
2
14.0
2
100
0
56
50
0
0
50
1.00
14809--14834
2
13.0
2
100
0
52
50
0
0
50
1.00
15555--15588
13
2.5
13
85
4
50
82
2
14
0
0.79

Tables:   1

The End!