Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010876.1 Corchorus capsularis cultivar CVL-1 contig10897, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32611

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12448--12504
30
1.9
29
85
3
78
57
14
0
28
1.37
13012--13047
2
18.5
2
94
5
65
50
0
0
50
1.00
13724--14093
183
2.0
185
98
1
726
40
10
5
43
1.63
23653--23691
2
20.5
2
89
10
64
51
0
0
48
1.00
32501--32549
2
25.0
2
80
12
57
44
2
2
51
1.24
32472--32535
27
2.4
27
84
5
76
45
4
1
48
1.32

Tables:   1

The End!