Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010892.1 Corchorus capsularis cultivar CVL-1 contig10913, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9343

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1808--1839
11
2.9
11
95
0
55
40
3
9
46
1.52
1796--1839
22
2.0
23
90
4
72
40
4
6
47
1.50
5317--5627
27
11.7
27
88
4
440
27
15
22
34
1.95
5324--6807
79
18.3
78
80
11
1528
26
16
21
34
1.95
5317--6833
52
28.0
54
82
9
1737
26
16
22
34
1.95
5563--5691
66
2.0
64
90
3
204
29
17
19
34
1.94
5629--6833
27
44.7
27
79
10
1134
26
16
21
35
1.95
6239--6743
154
3.0
178
77
16
494
26
15
21
36
1.94
7193--9343
663
3.2
655
83
6
2472
33
13
15
36
1.88
7152--9343
995
2.2
994
87
4
3129
33
13
15
36
1.88

Tables:   1

The End!