Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010895.1 Corchorus capsularis cultivar CVL-1 contig10916, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10843

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
476--1105
337
1.9
335
84
4
856
32
13
16
37
1.88
1122--1376
27
9.7
27
86
5
355
27
16
22
34
1.95
1122--1881
52
14.3
53
81
10
826
28
15
21
34
1.94
1314--1440
64
2.0
64
84
6
168
28
15
21
34
1.94
1378--1881
25
19.2
27
86
6
600
28
15
20
35
1.93
1287--1465
91
2.0
89
86
4
252
27
15
21
35
1.93
2964--2998
1
35.0
1
91
0
52
94
0
2
2
0.37
2957--2997
8
4.5
10
93
6
54
90
0
4
4
0.56
10064--10117
25
2.2
25
86
0
72
38
9
1
50
1.45

Tables:   1

The End!