Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000109.1 Corchorus capsularis cultivar CVL-1 contig00109, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1846

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46--159
50
2.3
49
80
4
120
42
7
13
36
1.73
829--983
47
3.3
47
89
0
220
48
7
21
22
1.75
1213--1273
7
8.6
7
74
3
50
55
1
22
19
1.52
1219--1277
14
4.1
14
78
4
64
54
3
22
20
1.59
1193--1347
35
4.2
35
75
12
148
54
3
23
18
1.59
1189--1337
78
1.9
78
87
2
219
56
3
22
17
1.56
1447--1542
21
4.5
21
76
6
86
47
8
21
21
1.77
1523--1578
15
3.9
15
74
9
62
57
5
21
16
1.59
1559--1677
21
5.5
22
75
20
83
52
7
16
22
1.69

Tables:   1

The End!