Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010904.1 Corchorus capsularis cultivar CVL-1 contig10925, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32490

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--2607
323
7.9
322
86
4
3298
35
16
14
33
1.90
62--2607
645
3.9
644
86
4
3639
35
16
14
33
1.90
2648--2719
29
2.4
29
81
2
81
38
26
12
22
1.89
3605--3790
86
2.2
83
93
2
309
30
31
28
9
1.88
3908--3985
24
3.2
24
90
3
122
55
20
20
3
1.59
3918--3980
12
5.2
12
70
0
54
55
15
23
4
1.59
10365--10406
2
21.5
2
95
4
77
50
0
0
50
1.00
15443--15477
2
17.5
2
93
0
61
51
0
2
45
1.16
15928--15952
1
25.0
1
100
0
50
0
0
0
100
0.00
17693--17735
17
2.6
16
85
10
59
20
20
20
37
1.95

Tables:   1

The End!