Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010906.1 Corchorus capsularis cultivar CVL-1 contig10927, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5496

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
48
0
0
51
1.00
1587--1612
2
13.0
2
100
0
52
50
0
0
50
1.00
1625--1691
23
3.0
22
82
6
80
7
4
35
52
1.50
1759--1804
22
2.1
22
91
0
74
21
21
8
47
1.77
1967--2013
24
2.0
24
95
0
85
4
21
42
31
1.72
3030--3089
16
3.8
16
82
6
77
53
0
38
8
1.31
3333--3377
21
2.1
21
91
0
72
17
35
11
35
1.86
3615--3683
32
2.2
32
86
0
93
11
34
43
10
1.75
4967--5048
41
2.0
41
95
2
148
14
15
12
57
1.66
4967--5069
41
2.5
41
82
4
129
11
14
11
62
1.55

Tables:   1

The End!