Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010914.1 Corchorus capsularis cultivar CVL-1 contig10935, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12619

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
394--451
22
2.7
23
89
5
77
50
5
22
22
1.69
564--593
15
1.9
16
93
6
53
50
6
13
30
1.67
460--648
55
3.5
55
83
1
263
49
6
17
25
1.72
617--671
18
3.2
17
75
14
60
47
7
18
27
1.74
641--735
32
2.9
31
77
16
93
46
7
23
23
1.77
812--1045
43
5.6
41
73
15
178
55
7
19
17
1.64
809--906
22
4.5
23
71
17
91
57
6
17
19
1.61
873--1165
22
13.9
21
71
15
144
55
6
19
17
1.64
1054--1167
21
5.2
21
72
18
83
57
6
16
20
1.61

Tables:   1

The End!