Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010924.1 Corchorus capsularis cultivar CVL-1 contig10945, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33362

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
952--994
6
7.2
6
87
10
52
0
9
34
55
1.32
953--988
19
1.9
18
88
5
54
0
11
36
52
1.37
3595--3635
19
2.2
19
86
0
55
26
7
24
41
1.81
4147--4214
31
2.2
32
89
7
104
30
14
4
50
1.63
4519--4556
19
2.0
20
85
15
53
28
5
2
63
1.30
4721--4883
22
7.3
22
73
5
121
33
8
19
38
1.82
4974--5278
22
13.6
22
67
15
135
40
8
15
34
1.78
5384--5431
19
2.5
19
93
3
78
45
10
18
25
1.81
5422--5904
22
22.1
22
67
16
132
38
10
14
36
1.81
5422--5624
45
4.8
43
71
14
118
42
9
12
34
1.76
5614--5675
23
2.7
23
79
0
70
40
4
14
40
1.67
19001--19025
2
12.5
2
100
0
50
52
0
0
48
1.00
25836--26354
197
2.6
200
87
1
738
36
16
12
34
1.87
30789--30832
14
3.4
14
70
23
51
50
9
0
40
1.34
30788--30838
24
2.1
24
100
0
102
47
7
0
45
1.32

Tables:   1

The End!