Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010930.1 Corchorus capsularis cultivar CVL-1 contig10951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17459

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27--70
23
1.9
23
90
9
72
25
31
20
22
1.98
4909--4933
2
12.5
2
100
0
50
48
0
0
52
1.00
6759--6910
21
7.2
21
75
5
146
26
12
21
40
1.88
6759--6910
42
3.6
42
87
3
216
26
12
21
40
1.88
7071--7103
16
2.1
16
94
0
57
39
9
0
51
1.34
7553--7581
13
2.2
13
100
0
58
27
6
0
65
1.18
14034--14301
22
12.1
22
77
8
197
36
15
8
39
1.79
14065--14320
44
5.8
44
79
7
236
34
15
9
40
1.79
14392--14537
22
6.6
22
76
6
125
35
13
9
41
1.77
14641--14765
22
5.7
22
76
11
121
39
18
8
34
1.80
14801--14963
22
7.3
21
79
8
137
38
20
9
31
1.85
15128--15165
19
2.0
20
85
15
53
63
2
5
28
1.30

Tables:   1

The End!