Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010935.1 Corchorus capsularis cultivar CVL-1 contig10956, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38357

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3146--4653
199
7.6
197
85
4
1809
34
17
13
33
1.90
3152--4659
594
2.6
582
85
4
1467
34
17
13
33
1.89
5599--5649
26
2.0
26
84
0
66
27
17
3
50
1.63
9572--9606
18
1.9
18
88
0
52
74
2
22
0
0.95
21761--21849
2
46.0
2
77
14
71
40
8
0
50
1.34
21761--21886
63
2.0
62
98
1
243
36
12
0
50
1.41
32082--32124
16
2.7
16
82
10
52
58
0
6
34
1.25
33189--33229
18
2.3
18
86
0
55
70
2
0
26
0.99

Tables:   1

The End!