Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010941.1 Corchorus capsularis cultivar CVL-1 contig10962, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8109

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
593--626
2
17.0
2
87
0
50
50
0
0
50
1.00
2040--2065
2
13.0
2
100
0
52
50
0
0
50
1.00
5481--5557
38
2.1
35
88
7
109
12
16
12
57
1.66
5689--5730
20
2.0
21
86
13
61
28
2
4
64
1.26
5898--6039
22
6.2
21
73
13
95
33
10
17
38
1.84
5944--6034
46
2.0
46
82
4
112
32
10
18
37
1.86
6075--6133
22
2.7
22
79
10
66
37
10
16
35
1.83
6150--6456
22
13.8
21
69
17
124
40
10
14
34
1.80
6288--6478
44
4.4
44
75
5
165
42
9
13
34
1.76
6309--6456
66
2.2
66
80
2
163
40
10
14
35
1.79
6210--6456
22
11.3
22
70
9
148
41
10
14
33
1.80
6562--6612
19
2.6
20
90
6
86
45
11
17
25
1.83
6562--7178
22
28.6
22
70
10
276
39
9
16
35
1.80
6791--6916
23
5.6
23
82
2
139
38
7
15
39
1.74
6954--7047
45
2.1
44
82
5
109
34
11
17
37
1.86

Tables:   1

The End!