Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010942.1 Corchorus capsularis cultivar CVL-1 contig10963, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15877

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13301--13361
19
3.4
16
68
23
50
50
6
16
26
1.69
13267--13397
38
3.5
38
86
7
144
48
6
17
27
1.73
13434--13567
34
3.9
33
76
10
135
52
6
14
26
1.67
13536--13613
40
1.9
41
92
7
133
51
7
16
24
1.71
13391--13669
74
3.9
69
80
9
265
50
6
17
26
1.69
13798--13927
28
4.3
29
72
17
120
56
6
20
17
1.62
13814--13931
15
7.6
15
68
19
55
57
5
19
17
1.58
13785--13945
65
2.5
65
91
2
261
57
5
19
18
1.60
13863--13927
29
2.3
28
86
2
94
55
7
20
16
1.65
13882--13949
29
2.3
30
84
2
84
54
5
20
19
1.64
13798--13988
94
2.0
93
82
5
224
54
5
20
19
1.63
13785--13998
65
3.3
63
85
6
225
55
5
20
19
1.61
13992--14033
20
2.2
20
91
4
68
69
0
14
16
1.20
14012--14075
33
2.0
31
84
6
83
60
3
15
20
1.48

Tables:   1

The End!