Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010943.1 Corchorus capsularis cultivar CVL-1 contig10964, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22820

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
2
20.0
2
94
0
71
50
2
0
47
1.14
871--1019
74
2.0
73
89
3
228
21
30
9
38
1.85
2581--2605
2
12.5
2
100
0
50
48
0
0
52
1.00
11355--11387
2
16.5
2
93
0
57
45
0
3
51
1.16
14176--14307
67
2.0
67
98
0
255
35
15
23
25
1.94
18561--18585
7
3.6
7
100
0
50
0
0
12
88
0.53
18547--18583
19
1.9
19
88
0
56
2
2
10
83
0.84
19095--19126
7
4.9
7
85
14
50
12
12
0
75
1.06
21331--21381
26
2.0
25
85
11
68
54
1
5
37
1.36
22470--22508
20
1.9
21
89
5
62
25
41
5
28
1.77
22667--22741
11
6.1
11
75
22
69
57
10
0
32
1.33
22657--22750
26
3.6
26
91
2
154
56
10
0
32
1.34
22657--22750
15
7.1
15
71
26
70
56
10
0
32
1.34

Tables:   1

The End!