Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010957.1 Corchorus capsularis cultivar CVL-1 contig10978, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34665

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1085--1181
33
3.0
32
81
4
113
21
40
27
10
1.86
1195--1372
90
2.0
90
95
2
322
29
27
23
20
1.99
1409--1461
10
5.2
10
75
20
56
33
18
22
24
1.97
4022--4048
2
13.5
2
100
0
54
48
0
0
51
1.00
4555--4600
18
2.6
17
80
6
56
30
4
0
65
1.12
4779--4812
16
2.1
16
88
5
50
0
8
17
73
1.08
5622--5710
43
2.0
47
84
8
123
32
4
5
57
1.42
7033--7137
42
2.5
42
85
0
138
26
17
17
39
1.91
7411--7551
42
3.4
42
84
2
149
23
15
19
41
1.89
7411--7682
42
6.7
43
73
9
142
23
15
20
40
1.91
7461--7679
118
1.9
118
84
1
296
23
15
21
40
1.91
12409--12439
14
2.2
14
94
0
53
61
9
9
19
1.54
33285--33364
39
2.0
40
88
7
119
18
33
12
35
1.89

Tables:   1

The End!