Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010962.1 Corchorus capsularis cultivar CVL-1 contig10983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34455

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5995--6025
2
15.5
2
100
0
62
51
0
0
48
1.00
7378--7430
26
2.0
26
100
0
106
37
7
15
39
1.75
9791--10061
146
1.9
146
88
1
418
35
11
14
38
1.82
9929--10164
122
1.9
123
85
3
325
34
10
15
39
1.82
10278--10319
2
21.0
2
95
0
75
50
2
0
47
1.14
14411--14469
27
2.2
27
90
0
91
30
5
20
44
1.73
17983--18018
1
36.0
1
100
0
72
0
0
0
100
0.00
18123--18192
33
2.2
32
90
7
108
34
7
11
47
1.67
22561--22724
43
3.9
42
73
10
145
37
26
12
24
1.90
22561--22737
84
2.1
84
86
4
241
36
26
12
24
1.91
25877--25918
21
2.0
21
81
9
50
42
9
11
35
1.74
32530--32694
89
1.9
87
82
5
206
40
15
16
27
1.89
32584--32848
122
2.2
122
93
0
440
40
13
17
27
1.88
33804--33948
48
3.0
48
95
0
254
16
24
33
26
1.96

Tables:   1

The End!