Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010964.1 Corchorus capsularis cultivar CVL-1 contig10985, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28298

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4054--4078
10
2.5
10
100
0
50
20
12
24
44
1.85
6054--6092
21
1.9
19
85
10
51
43
20
10
25
1.83
8933--9003
15
4.7
15
87
0
97
9
26
18
45
1.81
9138--9207
26
2.7
25
80
6
77
15
17
24
42
1.88
12945--13036
6
15.5
6
74
18
68
80
1
16
2
0.87
12945--13037
15
6.1
15
78
11
100
80
1
16
2
0.86
12945--13037
9
10.1
9
73
20
77
80
1
16
2
0.86
12946--13036
34
2.6
34
80
14
114
80
1
16
2
0.88
14516--14600
23
3.8
23
76
7
86
23
24
28
23
2.00
16957--16987
12
2.6
12
94
0
53
6
32
41
19
1.77
23496--23557
30
2.1
30
90
0
97
3
27
43
25
1.70
23879--23997
33
3.5
33
80
8
125
23
42
26
7
1.80
25013--25042
15
2.0
15
93
0
51
76
0
0
23
0.78
26538--26648
33
3.3
33
80
7
134
23
9
22
45
1.81
26591--26678
33
2.7
32
83
3
95
28
9
21
40
1.84
28167--28200
8
4.1
8
85
7
50
58
14
2
23
1.50

Tables:   1

The End!