Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010973.1 Corchorus capsularis cultivar CVL-1 contig10994, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31544

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
123--170
22
2.2
22
100
0
96
43
4
8
43
1.53
1236--1565
41
7.8
40
81
12
315
23
10
26
40
1.86
1242--1565
84
3.8
83
86
6
370
23
9
26
40
1.85
1285--1565
125
2.2
126
89
5
424
24
9
26
39
1.87
4616--4646
15
2.1
14
94
5
53
0
12
3
83
0.75
7915--7965
20
2.6
19
78
9
57
43
3
13
39
1.63
14993--15023
6
5.2
6
100
0
62
48
16
0
35
1.46
15966--15991
10
2.6
10
100
0
52
23
7
19
50
1.73
23054--23079
10
2.6
10
100
0
52
23
7
19
50
1.73
26689--26738
18
2.8
18
84
0
73
12
20
22
46
1.83
26722--26761
21
1.9
21
94
0
71
22
20
22
35
1.96

Tables:   1

The End!