Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010977.1 Corchorus capsularis cultivar CVL-1 contig10998, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27725

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6281--6401
33
3.6
33
78
8
120
23
41
26
8
1.83
6874--6911
18
2.1
18
90
0
58
42
2
21
34
1.67
7431--7465
5
6.8
5
93
6
61
80
0
0
20
0.72
13698--13731
17
2.0
17
94
0
59
23
5
14
55
1.61
14646--14736
33
2.8
33
86
8
116
9
26
39
24
1.86
14854--14899
23
2.0
23
95
0
83
28
30
19
21
1.98
26496--26529
8
4.1
8
85
7
50
58
14
2
23
1.50
26602--26636
10
3.4
10
96
4
61
88
0
0
11
0.51
26602--26636
9
3.8
9
88
7
52
88
0
0
11
0.51

Tables:   1

The End!