Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010979.1 Corchorus capsularis cultivar CVL-1 contig11000, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9100

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2134--2184
16
3.2
16
83
2
68
72
3
1
21
1.11
3952--4054
33
3.1
33
83
5
111
19
30
32
18
1.96
3973--4055
33
2.5
33
86
0
112
19
28
30
21
1.98
4062--4125
33
1.9
33
87
6
94
12
34
37
15
1.85
5046--5081
15
2.3
16
90
4
56
5
13
2
77
1.05
7359--7416
22
2.6
22
80
0
71
37
5
15
41
1.70
7613--7919
22
13.8
21
69
17
124
41
10
14
32
1.81
7751--7944
88
2.2
88
80
4
214
43
9
13
33
1.77
7753--7944
44
4.4
43
76
7
147
43
9
13
33
1.77
8069--8447
22
17.3
22
68
10
152
37
10
16
36
1.82
8188--8251
23
2.8
23
88
4
85
40
6
14
39
1.71
8367--8410
23
1.9
23
86
9
63
29
11
18
40
1.85
8966--9083
22
5.4
21
74
9
105
44
9
14
31
1.77
9040--9080
21
1.9
22
90
5
66
48
9
17
24
1.76
8974--9083
43
2.5
43
76
15
111
44
9
15
30
1.77

Tables:   1

The End!