Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010982.1 Corchorus capsularis cultivar CVL-1 contig11003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11184

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4119--4161
11
3.7
11
81
9
50
37
6
23
32
1.82
5597--6007
22
19.2
22
68
18
176
21
20
5
52
1.67
5600--5670
29
2.4
30
86
9
94
21
19
2
56
1.55
5529--5833
159
1.9
157
80
10
358
22
20
4
51
1.66
5757--5922
29
5.8
28
68
13
79
22
19
4
52
1.65
5840--6007
87
2.0
83
87
8
245
21
22
5
50
1.68
6023--6100
40
1.9
41
89
7
124
20
19
5
55
1.62
8095--8165
29
2.4
31
84
9
87
54
2
19
22
1.57
8242--8330
28
3.3
26
78
15
74
55
1
23
20
1.50
8283--8341
27
2.1
28
90
3
93
57
0
23
18
1.40
9550--9587
17
2.1
19
85
9
53
0
15
13
71
1.16

Tables:   1

The End!