Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010985.1 Corchorus capsularis cultivar CVL-1 contig11006, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29669

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2384--2432
21
2.3
22
83
13
59
44
12
10
32
1.75
7826--8172
183
1.9
182
81
5
423
28
17
18
34
1.94
12435--12602
91
1.8
91
89
2
264
38
7
16
37
1.76
12470--12557
41
2.1
42
87
2
124
34
9
19
37
1.83
12512--12652
50
2.8
50
81
5
153
40
7
15
36
1.75
13157--13619
48
9.7
48
83
3
574
11
25
22
40
1.87
23815--23873
30
2.0
30
86
6
84
23
30
15
30
1.95
24253--24337
33
2.6
33
86
0
125
42
15
8
34
1.77
24353--24457
33
3.2
32
81
5
120
44
20
9
24
1.81

Tables:   1

The End!