Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010994.1 Corchorus capsularis cultivar CVL-1 contig11015, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31533

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--95
32
2.3
32
88
0
103
12
47
32
8
1.70
52--158
32
3.3
32
77
5
117
14
38
34
13
1.84
66--170
32
3.2
32
76
7
106
11
34
39
15
1.83
8003--8055
16
3.2
17
78
10
74
13
7
39
39
1.73
8005--8109
32
3.3
32
86
0
147
16
10
37
36
1.83
10717--10775
25
2.5
24
86
5
75
35
18
1
44
1.60
10785--10902
26
4.7
26
74
9
111
54
9
1
34
1.43
25724--25758
18
1.9
18
88
0
52
62
5
2
28
1.32

Tables:   1

The End!