Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010999.1 Corchorus capsularis cultivar CVL-1 contig11020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35114

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--46
2
22.5
2
95
0
81
0
46
0
53
1.00
1964--1999
3
12.0
3
100
0
72
66
0
0
33
0.92
4234--4282
3
16.3
3
100
0
98
67
0
0
32
0.91
13671--13732
32
1.9
32
93
0
106
22
12
14
50
1.77
19997--20032
19
1.9
18
88
5
54
41
2
22
33
1.68
20629--20664
18
2.1
17
94
5
63
11
16
8
63
1.49
25260--25295
19
1.9
18
88
5
54
41
2
22
33
1.68
32365--32395
15
2.1
15
93
0
53
19
16
0
64
1.29
32350--32422
24
2.9
24
81
6
65
19
19
1
60
1.44
32397--32529
42
3.1
42
79
14
128
27
20
2
50
1.60
32453--32566
58
1.9
59
92
1
194
25
21
3
49
1.66
33033--33175
40
3.5
41
82
11
179
23
17
7
51
1.70
33024--33175
81
1.9
82
86
6
220
23
17
7
51
1.69

Tables:   1

The End!