Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011000.1 Corchorus capsularis cultivar CVL-1 contig11021, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38433

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
781--811
3
10.3
3
100
0
62
32
0
0
67
0.91
16581--16614
16
2.2
16
89
5
52
29
2
8
58
1.43
20706--20801
16
5.3
16
73
21
66
27
19
4
48
1.67
20684--20785
42
2.4
42
82
11
111
26
20
3
49
1.66
20709--20822
58
1.9
59
92
1
194
25
20
4
50
1.67
22196--22221
2
13.0
2
100
0
52
50
0
0
50
1.00
24402--24437
3
11.3
3
88
11
54
30
2
0
66
1.06
26499--26540
21
2.0
21
86
9
59
42
23
9
23
1.83
26624--26654
16
1.9
16
93
0
53
54
19
6
19
1.65
32139--32197
29
2.0
29
100
0
118
37
10
13
38
1.79

Tables:   1

The End!