Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011003.1 Corchorus capsularis cultivar CVL-1 contig11024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5945

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2595--2669
38
1.9
39
94
2
134
38
10
17
33
1.84
2704--2736
3
11.0
3
100
0
66
66
0
0
33
0.92
4384--4430
24
2.0
24
83
8
60
27
25
2
44
1.65
4383--4433
8
6.4
8
75
6
50
25
25
1
47
1.63
4542--4612
8
9.8
8
75
20
57
28
21
5
45
1.74
4542--4611
14
4.9
14
80
7
61
28
21
5
44
1.75
4769--4815
14
3.4
14
82
11
60
27
21
2
48
1.61
5001--5083
22
3.9
21
80
7
105
25
25
6
43
1.77
5122--5156
16
2.2
16
94
0
61
25
11
5
57
1.56
5095--5173
38
2.1
38
83
4
97
29
17
6
46
1.73
5230--5277
14
3.4
14
76
21
55
27
20
6
45
1.75
5346--5392
19
2.5
19
86
6
60
27
17
8
46
1.76

Tables:   1

The End!