Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011012.1 Corchorus capsularis cultivar CVL-1 contig11033, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4002

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1699
323
5.4
314
82
6
1681
32
15
16
35
1.91
1--1512
323
4.7
319
86
4
1791
33
15
16
34
1.91
3497--3657
86
1.9
86
92
2
270
29
33
27
9
1.89
3771--4000
10
22.6
10
74
10
99
38
6
47
6
1.58
3932--4002
2
35.5
2
100
0
142
49
0
50
0
1.00
3876--3945
29
2.4
29
78
0
77
31
10
50
8
1.66

Tables:   1

The End!