Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011013.1 Corchorus capsularis cultivar CVL-1 contig11034, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15539

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
306--334
4
7.2
4
100
0
58
48
0
51
0
1.00
951--1003
27
2.0
27
92
0
88
35
11
20
32
1.88
969--1040
37
1.9
37
91
5
119
33
18
20
27
1.96
1009--1148
59
2.4
59
83
1
181
42
12
15
30
1.82
3040--3075
14
2.6
14
86
13
56
0
11
2
86
0.68
3051--3085
18
1.9
18
88
0
52
2
8
2
85
0.79
5733--5818
31
2.8
31
80
3
102
31
24
25
18
1.98
7233--7309
29
2.6
28
81
6
91
16
23
14
45
1.84
10640--10901
107
2.5
105
90
5
402
39
7
9
43
1.67
12752--12897
76
1.9
76
91
0
238
41
15
4
38
1.68

Tables:   1

The End!