Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011014.1 Corchorus capsularis cultivar CVL-1 contig11035, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27025

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
486--684
31
6.6
29
74
14
163
34
18
19
27
1.95
490--653
60
2.7
60
93
3
269
34
19
18
26
1.95
521--622
29
3.4
29
75
17
111
32
18
19
29
1.96
711--875
59
2.8
60
87
3
253
29
20
17
32
1.96
1649--1683
17
2.0
18
88
5
54
54
0
14
31
1.40
2479--2520
17
2.3
19
88
12
61
69
4
4
21
1.26
2870--3032
81
2.0
81
97
0
308
42
7
17
31
1.78
18720--18781
30
2.1
30
100
0
124
35
3
16
45
1.63
25696--25738
20
2.3
18
84
8
50
4
18
0
76
0.95
25869--25912
17
2.6
16
82
10
52
2
34
2
61
1.21

Tables:   1

The End!