Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011015.1 Corchorus capsularis cultivar CVL-1 contig11036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60375

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16090--16126
18
2.1
18
85
14
51
10
16
16
56
1.66
20409--20441
2
16.5
2
100
0
66
48
0
0
51
1.00
20898--20952
27
2.0
27
100
0
110
21
14
27
36
1.93
20901--20964
27
2.4
27
89
0
92
20
15
29
34
1.94
30338--30362
11
2.3
11
100
0
50
48
8
8
36
1.62
30495--30536
2
21.5
2
85
4
59
52
0
0
47
1.00
33294--33326
6
5.5
6
100
0
66
15
0
0
84
0.61
41191--41223
2
16.5
2
93
0
57
48
0
0
51
1.00
58820--60375
324
4.9
321
81
6
1653
36
17
13
32
1.89

Tables:   1

The End!