Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011016.1 Corchorus capsularis cultivar CVL-1 contig11037, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52148

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--4690
320
14.7
321
84
4
5753
34
17
15
33
1.90
4911--6484
321
4.9
321
85
3
2061
34
16
15
33
1.91
14389--15589
326
3.6
324
80
7
1261
32
14
16
36
1.89
15644--17774
332
6.4
331
78
7
1999
31
14
17
35
1.91
15644--17774
662
3.2
665
89
2
3226
31
14
17
35
1.91
18563--19094
279
1.9
279
83
6
687
35
14
15
34
1.88
18835--19704
332
2.6
330
82
5
1099
33
14
16
36
1.89
23026--23090
27
2.4
27
94
2
114
55
7
9
27
1.59
23026--23098
27
2.7
26
89
6
85
57
6
9
26
1.55
48683--48717
9
3.9
9
100
0
70
45
22
0
31
1.53
50772--50881
55
2.0
54
91
7
177
35
4
10
50
1.57
51906--52148
105
2.4
104
86
7
336
39
9
9
41
1.70

Tables:   1

The End!