Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011021.1 Corchorus capsularis cultivar CVL-1 contig11042, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7160

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2892--2924
17
1.9
17
93
0
57
39
3
15
42
1.62
4122--4160
15
2.6
16
80
16
55
56
5
10
28
1.54
4196--4225
11
2.7
11
100
0
60
83
0
16
0
0.65
4636--4671
16
2.2
16
100
0
72
27
8
16
47
1.75
5326--5670
104
3.3
104
91
6
554
29
15
23
31
1.95
5326--5671
35
9.9
35
91
3
545
29
15
23
31
1.95
5620--6188
35
16.5
35
90
3
834
27
19
17
35
1.94
5480--6213
70
10.6
70
89
4
801
27
18
19
34
1.95
5620--6168
171
3.2
174
90
4
864
26
19
17
35
1.94
5654--6213
206
2.7
206
94
1
953
27
19
17
35
1.94

Tables:   1

The End!