Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011025.1 Corchorus capsularis cultivar CVL-1 contig11046, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6438

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
663--950
60
4.7
60
80
8
250
40
17
19
22
1.91
846--1014
64
2.6
64
82
8
184
42
17
17
23
1.89
1132--1218
34
2.5
34
83
9
97
37
26
19
16
1.92
1193--1460
71
3.8
71
92
1
405
38
21
17
22
1.93
1193--1460
140
1.9
142
88
1
405
38
21
17
22
1.93
1408--1509
49
2.1
49
92
0
168
37
24
17
20
1.94
1337--1580
120
2.0
120
94
0
425
39
21
17
22
1.92
1457--1655
71
2.8
71
94
0
346
40
22
16
21
1.91
1266--1701
191
2.3
191
95
0
791
38
22
17
21
1.93
1599--1729
50
2.7
49
93
2
226
35
25
21
18
1.96
3172--3219
23
2.1
23
88
3
71
14
18
0
66
1.25
3546--3645
44
2.2
44
91
1
155
40
15
8
37
1.76

Tables:   1

The End!