Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011028.1 Corchorus capsularis cultivar CVL-1 contig11049, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41575

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2515--2547
2
16.5
2
100
0
66
51
48
0
0
1.00
2547--2580
2
17.0
2
100
0
68
50
0
0
50
1.00
5676--5751
40
1.9
39
97
2
143
39
5
10
44
1.61
5930--5972
3
14.3
3
100
0
86
34
0
0
65
0.93
6457--6588
65
2.0
65
95
0
237
43
10
4
40
1.59
8150--8227
38
2.1
38
100
0
156
43
10
20
25
1.83
12006--12040
11
3.2
11
83
0
52
77
17
5
0
0.96
33505--33569
34
1.9
34
93
0
112
27
20
18
33
1.96
34257--34290
17
2.0
17
88
0
50
70
0
5
23
1.09
35549--35598
17
3.1
17
72
21
61
70
6
10
14
1.33
40623--40731
56
1.9
56
87
3
157
37
11
11
39
1.78

Tables:   1

The End!