Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011032.1 Corchorus capsularis cultivar CVL-1 contig11053, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  114660

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10022--10116
31
3.1
31
83
3
102
32
24
23
20
1.98
14626--14650
1
25.0
1
100
0
50
0
0
0
100
0.00
14880--14908
2
15.0
2
92
7
51
51
0
0
48
1.00
38628--38667
3
13.3
3
94
0
71
32
2
0
65
1.06
46297--46323
7
3.9
7
100
0
54
14
25
29
29
1.95
57435--57499
32
2.0
32
100
0
130
18
15
18
47
1.82
61974--62027
27
1.9
29
88
7
85
55
24
7
12
1.63
67236--67287
27
1.9
27
96
0
95
40
23
13
23
1.89
81545--81580
2
18.0
2
88
0
54
50
5
0
44
1.25
85741--85837
48
2.0
48
100
0
194
19
22
4
53
1.62
93132--93156
12
2.1
12
100
0
50
32
16
16
36
1.90
102661--102691
13
2.4
13
94
0
53
90
0
6
3
0.55
104972--104999
13
2.2
13
100
0
56
28
25
7
39
1.82
108177--108440
107
2.5
105
90
3
388
41
8
8
41
1.66
112365--112430
35
2.0
35
88
8
102
51
16
13
18
1.76

Tables:   1

The End!