Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011037.1 Corchorus capsularis cultivar CVL-1 contig11058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18287

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--332
31
10.7
31
80
6
359
10
28
31
29
1.90
1--332
63
5.4
62
77
8
336
10
28
31
29
1.90
768--818
22
2.3
23
86
3
68
5
29
45
19
1.74
952--1275
91
3.5
91
86
2
407
14
23
30
32
1.94
1236--1561
32
10.4
32
77
7
285
11
28
30
29
1.91
1236--1561
95
3.5
95
70
12
294
11
28
30
29
1.91
1137--1556
186
2.3
186
85
2
556
12
27
30
30
1.93
952--1465
91
5.6
91
75
8
403
13
24
29
32
1.93
1973--2029
22
2.6
22
88
0
87
3
35
40
21
1.70
3254--3298
21
2.1
21
84
8
56
8
13
17
60
1.58
3844--4584
325
2.3
323
77
10
704
35
15
13
35
1.87
4263--4954
376
1.8
371
83
7
921
35
16
13
34
1.87
6095--7306
630
1.9
638
83
5
1589
35
17
13
33
1.89
9477--9514
14
2.6
14
91
4
58
0
60
0
39
0.97
10601--11344
326
2.3
318
81
6
816
34
16
13
34
1.89
15716--16954
330
3.8
323
79
6
1197
35
17
14
33
1.89
16981--18089
323
3.4
320
80
7
1064
34
17
15
32
1.91

Tables:   1

The End!