Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011046.1 Corchorus capsularis cultivar CVL-1 contig11067, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69055

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
819--1446
335
1.9
333
85
3
877
32
14
16
37
1.88
1719--1761
12
3.5
12
76
17
52
55
4
4
34
1.41
1714--1764
25
2.0
25
100
0
102
52
3
7
35
1.49
3140--3219
38
2.1
38
100
0
160
37
6
25
31
1.81
51039--51068
2
15.0
2
100
0
60
50
0
0
50
1.00
52449--52481
14
2.4
14
94
0
57
0
60
0
39
0.97
53490--53518
13
2.2
13
100
0
58
37
13
13
34
1.85
55879--55913
18
1.9
18
88
11
54
0
28
0
71
0.86
60213--60239
2
13.5
2
100
0
54
48
0
0
51
1.00
68984--69055
2
36.0
2
100
0
144
50
0
50
0
1.00

Tables:   1

The End!