Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011047.1 Corchorus capsularis cultivar CVL-1 contig11068, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28604

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4516--4554
20
1.9
21
94
5
71
23
15
25
35
1.94
9222--9263
21
2.0
21
100
0
84
47
4
4
42
1.45
16243--16308
22
3.3
22
68
24
72
22
15
31
30
1.95
16229--16308
38
2.1
38
97
0
151
23
15
31
30
1.95
16229--16305
16
4.4
17
73
20
61
24
14
31
29
1.94
17118--17148
6
5.2
6
100
0
62
0
16
0
83
0.64
20857--20897
3
13.7
3
100
0
82
34
0
0
65
0.93
22406--22458
27
2.0
27
92
0
88
11
24
3
60
1.47
23300--23333
3
11.3
3
100
0
68
0
32
0
67
0.91
26443--26469
2
13.5
2
100
0
54
51
0
48
0
1.00
28106--28146
2
20.5
2
100
0
82
51
0
0
48
1.00

Tables:   1

The End!