Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011048.1 Corchorus capsularis cultivar CVL-1 contig11069, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87837

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2572--2604
14
2.4
14
100
0
66
36
0
63
0
0.95
6722--6890
78
2.2
78
88
4
243
37
10
0
51
1.41
6980--7023
23
1.9
23
85
0
61
38
6
4
50
1.50
13505--13541
2
18.5
2
100
0
74
48
0
0
51
1.00
14307--14333
13
2.1
13
100
0
54
44
33
0
22
1.53
32627--32663
9
4.0
9
86
6
56
24
2
21
51
1.61
32626--32663
19
2.0
19
94
0
67
26
2
21
50
1.62
36219--36251
3
11.0
3
93
0
57
0
66
30
3
1.06
37685--37743
32
2.0
30
81
15
70
55
5
0
38
1.22
47610--47656
13
3.6
13
83
8
51
82
10
6
0
0.82
52607--52676
29
2.4
29
85
2
86
38
28
12
20
1.89
66176--66253
39
2.0
39
94
0
138
51
2
24
21
1.60
73450--73519
36
1.9
36
100
0
140
32
14
20
32
1.92
76517--76541
13
1.9
13
100
0
50
52
8
24
16
1.70
77625--77651
2
13.5
2
100
0
54
48
0
0
51
1.00
79557--79750
102
1.9
102
81
2
237
29
24
13
32
1.94
80300--80368
29
2.4
29
85
4
86
39
26
14
20
1.91
86219--86322
52
2.0
52
98
0
199
27
13
27
30
1.94

Tables:   1

The End!