Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011049.1 Corchorus capsularis cultivar CVL-1 contig11070, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42201

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2595--2634
5
7.0
6
81
18
50
50
20
0
30
1.49
2603--2637
16
2.2
16
100
0
70
48
20
0
31
1.50
3180--3234
9
5.5
10
81
14
53
58
1
0
40
1.09
3200--3232
3
11.0
3
100
0
66
66
0
0
33
0.92
16904--17024
30
4.0
30
85
0
161
29
10
36
23
1.89
22429--22468
16
2.3
18
83
8
57
42
0
7
50
1.30
24193--24252
31
1.9
31
100
0
120
35
21
6
36
1.80
38302--38345
22
2.0
22
100
0
88
9
27
22
40
1.84

Tables:   1

The End!