Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011051.1 Corchorus capsularis cultivar CVL-1 contig11072, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39063

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--97
2
49.5
2
91
4
162
0
52
0
47
1.00
12066--12091
5
5.2
5
100
0
52
80
0
19
0
0.71
12178--12208
2
15.5
2
100
0
62
48
0
0
51
1.00
17437--17461
11
2.3
11
100
0
50
0
0
8
92
0.40
18018--18046
2
14.5
2
100
0
58
48
0
0
51
1.00
27207--27385
92
1.9
92
86
0
250
23
16
28
31
1.96
31276--31333
30
1.9
31
85
3
82
31
8
22
37
1.84
37000--37103
51
2.0
51
98
0
199
33
13
9
43
1.77

Tables:   1

The End!