Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011055.1 Corchorus capsularis cultivar CVL-1 contig11076, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80607

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2531--2581
16
3.1
16
70
13
50
49
31
9
9
1.69
13250--13333
30
2.9
29
85
3
116
63
9
3
23
1.41
13452--13500
24
2.0
24
100
0
98
38
4
0
57
1.18
23135--23215
39
2.1
39
95
0
144
51
14
14
18
1.76
35886--35916
2
15.5
2
100
0
62
0
51
0
48
1.00
49789--49814
1
26.0
1
100
0
52
100
0
0
0
0.00
61983--62035
3
17.0
3
88
7
61
1
5
64
28
1.27
74581--74619
4
9.8
4
88
0
51
0
28
0
71
0.86
74579--74621
16
2.9
16
80
19
58
0
30
0
69
0.88
76127--76187
30
2.0
30
100
0
122
50
6
13
29
1.66
76542--76594
20
2.6
19
76
8
52
33
7
7
50
1.59

Tables:   1

The End!