Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011063.1 Corchorus capsularis cultivar CVL-1 contig11084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5247

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2707--2748
21
2.0
21
90
0
66
19
19
38
23
1.93
3075--3172
51
1.9
51
89
0
151
16
11
14
58
1.64
3706--3732
9
3.0
9
100
0
54
44
0
0
55
0.99
3704--3735
11
3.1
11
86
13
50
43
0
0
56
0.99
4550--4588
2
19.5
2
100
0
78
51
0
0
48
1.00
4689--4730
2
20.5
2
86
13
59
47
0
4
47
1.23
4689--4730
19
2.2
20
91
4
68
47
0
4
47
1.23

Tables:   1

The End!